Genome assembly of the Korean intertidal mud-creeper <i>Batillaria attramentaria</i>
- 주제(기타) Multidisciplinary Sciences
- 설명문(일반) [Patra, Ajit Kumar; Ho, Phuong-Thao; Jun, Siyeong; Kim, Yuseob; Won, Yong-Jin] Ewha Womans Univ, Dept Life Sci, Div Ecosci, Seoul, South Korea; [Ho, Phuong-Thao] Van Lang Univ, Sci & Technol Adv Inst, Lab Ecol & Environm Management, Ho Chi Minh City, Vietnam; [Ho, Phuong-Thao] US Vietnam Talent Int Sch, Dept Int Program, Ho Chi Minh City, Vietnam; [Lee, Seung Jae] DNA Link, Bioinformat Team, Seoul, South Korea
- 등재 SCIE, SCOPUS
- OA유형 Green Published, gold
- 발행기관 NATURE PORTFOLIO
- 발행년도 2023
- 총서유형 Journal
- URI http://www.dcollection.net/handler/ewha/000000211397
- 본문언어 영어
- Published As https://doi.org/10.1038/s41597-023-02403-9
- PubMed 37507420
초록/요약
Batillaridae is a common gastropod family that occurs abundantly in the shallow coastal zone of the intertidal mudflats of the northwest Pacific Ocean, Australasia, and North America. In this family, Batillaria attramentaria is known for its biological invasion and colonization in estuarine and intertidal zones. It can endure and adapt the harsh intertidal conditions such as frequent temperature alteration, salinity, and air exposure. Therefore, we sequenced and assembled this Korean batillariid genome to get insight into its intertidal adaptive features. Approximately 53 Gb of DNA sequences were generated, and 863 scaffolds were assembled into a draft genome of 0.715 Gb with 97.1% BUSCO completeness value. A total of 40,596 genes were predicted. We estimated that B. attramentaria and Conus consors diverged about 230 million years ago (MYA) based on the phylogenetic analysis of closely related gastropod species. This genome study sets the footstep for genomics studies among native and introduced Batillaria populations and the Batillaridae family members.
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